CRNT4SBML
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Contents:
CRNT4SBML
Installation
Steps for Detecting Bistability
Quick Start
Parallel CRNT4SBML
Docker and CRNT4SBML
Creating Physiological Bounds
CellDesigner Walkthrough
Low Deficiency Approach
Mass Conservation Approach Walkthrough
Semi-diffusive Approach Walkthrough
General Approach Walkthrough
Numerical Optimization Routine
Numerical Continuation Routine
Direct Simulation for the General Approach
Creating the Equilibrium Manifold
Confidence Level Routine
Generating Presentable C-graphs
Further Examples
An Example User Case Scenario
Reference
Contributing
Credits
History
Bibliography
CRNT4SBML
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Overview: module code
All modules for which code is available
crnt4sbml.c_graph
crnt4sbml.crnt
crnt4sbml.general_approach
crnt4sbml.low_deficiency_approach
crnt4sbml.mass_conservation_approach
crnt4sbml.semi_diffusive_approach
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